IL_4UJE_072
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_072 not in the Motif Atlas
- Geometric match to IL_4V9F_050
- Geometric discrepancy: 0.2789
- The information below is about IL_4V9F_050
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 33
Unit IDs
4UJE|1|A2|G|2383
4UJE|1|A2|G|2384
4UJE|1|A2|U|2385
4UJE|1|A2|U|2386
*
4UJE|1|A2|A|2760
4UJE|1|A2|C|2761
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CX
- 60S RIBOSOMAL PROTEIN L23A
- Chain Cg
- 60S RIBOSOMAL PROTEIN L34
- Chain Cj
- 60S RIBOSOMAL PROTEIN L37
- Chain Cl
- 60S RIBOSOMAL PROTEIN L39
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