IL_4UJE_096

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GAAUG*CGC

Length

8 nucleotides

Bulged bases

4UJE|1|A2|A|3680, 4UJE|1|A2|A|3681

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|3679
4UJE|1|A2|A|3680
4UJE|1|A2|A|3681
4UJE|1|A2|U|3682
4UJE|1|A2|G|3683
*
4UJE|1|A2|C|3708
4UJE|1|A2|G|3709
4UJE|1|A2|C|3710

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain B1

Small subunit ribosomal RNA; SSU rRNA

Chain CA

60S RIBOSOMAL PROTEIN L8