IL_4UJE_183
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- AGGGCAAGUC*GCU
- Length
- 13 nucleotides
- Bulged bases
- 4UJE|1|B1|G|606
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_183 not in the Motif Atlas
- Geometric match to IL_4V88_470
- Geometric discrepancy: 0.1841
- The information below is about IL_4V88_470
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4UJE|1|B1|A|599
4UJE|1|B1|G|600
4UJE|1|B1|G|601
4UJE|1|B1|G|602
4UJE|1|B1|C|603
4UJE|1|B1|A|604
4UJE|1|B1|A|605
4UJE|1|B1|G|606
4UJE|1|B1|U|607
4UJE|1|B1|C|608
*
4UJE|1|B1|G|635
4UJE|1|B1|C|636
4UJE|1|B1|U|637
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain AX
- Messenger RNA
- Chain BC
- 40S RIBOSOMAL PROTEIN S2
- Chain BJ
- 40S RIBOSOMAL PROTEIN S9
- Chain BX
- 40S RIBOSOMAL PROTEIN S23
- Chain Be
- 40S RIBOSOMAL PROTEIN S30
Coloring options: