IL_4UJE_223

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UACGCG*CCCCCA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|B1|U|1408
4UJE|1|B1|A|1409
4UJE|1|B1|C|1410
4UJE|1|B1|G|1411
4UJE|1|B1|C|1412
4UJE|1|B1|G|1413
*
4UJE|1|B1|C|1433
4UJE|1|B1|C|1434
4UJE|1|B1|C|1435
4UJE|1|B1|C|1436
4UJE|1|B1|C|1437
4UJE|1|B1|A|1438

Current chains

Chain B1

18S Ribosomal RNA

Nearby chains

Chain BQ

40S RIBOSOMAL PROTEIN S16

Chain BT

40S RIBOSOMAL PROTEIN S19

Chain BU

40S RIBOSOMAL PROTEIN S20