IL_4UJE_226

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

4UJE|1|B1|C|1554, 4UJE|1|B1|A|1579, 4UJE|1|B1|A|1580, 4UJE|1|B1|C|1581

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|B1|G|1550
4UJE|1|B1|U|1551
4UJE|1|B1|G|1552
4UJE|1|B1|C|1553
4UJE|1|B1|C|1554
4UJE|1|B1|U|1555
4UJE|1|B1|A|1556
4UJE|1|B1|C|1557
4UJE|1|B1|C|1558
*
4UJE|1|B1|G|1577
4UJE|1|B1|U|1578
4UJE|1|B1|A|1579
4UJE|1|B1|A|1580
4UJE|1|B1|C|1581
4UJE|1|B1|C|1582

Current chains

Chain B1

18S Ribosomal RNA

Nearby chains

Chain BD

40S RIBOSOMAL PROTEIN S3

Chain BK

40S RIBOSOMAL PROTEIN S10

Chain BT

40S RIBOSOMAL PROTEIN S19

Chain BU

40S RIBOSOMAL PROTEIN S20

Chain Bd

40S RIBOSOMAL PROTEIN S29