IL_4UJE_231
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_231 not in the Motif Atlas
- Geometric match to IL_4E48_002
- Geometric discrepancy: 0.1428
- The information below is about IL_4E48_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
4UJE|1|B1|G|1706
4UJE|1|B1|U|1707
4UJE|1|B1|C|1708
*
4UJE|1|B1|G|1826
4UJE|1|B1|U|1827
4UJE|1|B1|C|1828
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AV
- Transfer RNA; tRNA
- Chain AX
- Messenger RNA
- Chain Cn
- 60S RIBOSOMAL PROTEIN L41
Coloring options: