IL_4UJE_243

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CCCGCUCCCCGGCGCCG*CGCGCGCCCGGG

Length

29 nucleotides

Bulged bases

4UJE|1|A2|G|254, 4UJE|1|A2|C|257

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|163
4UJE|1|A2|C|164
4UJE|1|A2|C|165
4UJE|1|A2|G|166
4UJE|1|A2|C|167
4UJE|1|A2|U|168
4UJE|1|A2|C|169
4UJE|1|A2|C|170
4UJE|1|A2|C|171
4UJE|1|A2|C|172
4UJE|1|A2|G|173
4UJE|1|A2|G|174
4UJE|1|A2|C|175
4UJE|1|A2|G|176
4UJE|1|A2|C|177
4UJE|1|A2|C|178
4UJE|1|A2|G|179
*
4UJE|1|A2|C|249
4UJE|1|A2|G|250
4UJE|1|A2|C|251
4UJE|1|A2|G|252
4UJE|1|A2|C|253
4UJE|1|A2|G|254
4UJE|1|A2|C|255
4UJE|1|A2|C|256
4UJE|1|A2|C|257
4UJE|1|A2|G|258
4UJE|1|A2|G|259
4UJE|1|A2|G|260

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CL

60S RIBOSOMAL PROTEIN L13

Chain Ch

60S RIBOSOMAL PROTEIN L35