3D structure

PDB id
4UJE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
GGGACGGCUGG*CUCGCCGAAUCCC
Length
24 nucleotides
Bulged bases
4UJE|1|A2|A|927
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UJE|1|A2|G|708
4UJE|1|A2|G|709
4UJE|1|A2|G|710
4UJE|1|A2|A|711
4UJE|1|A2|C|712
4UJE|1|A2|G|713
4UJE|1|A2|G|714
4UJE|1|A2|C|715
4UJE|1|A2|U|716
4UJE|1|A2|G|717
4UJE|1|A2|G|718
*
4UJE|1|A2|C|920
4UJE|1|A2|U|921
4UJE|1|A2|C|922
4UJE|1|A2|G|923
4UJE|1|A2|C|924
4UJE|1|A2|C|925
4UJE|1|A2|G|926
4UJE|1|A2|A|927
4UJE|1|A2|A|928
4UJE|1|A2|U|929
4UJE|1|A2|C|930
4UJE|1|A2|C|931
4UJE|1|A2|C|932

Current chains

Chain A2
28S Ribosomal RNA

Nearby chains

Chain CC
60S RIBOSOMAL PROTEIN L4
Chain CE
60S RIBOSOMAL PROTEIN L6
Chain CF
60S RIBOSOMAL PROTEIN L7
Chain CM
60S RIBOSOMAL PROTEIN L14
Chain CS
60S RIBOSOMAL PROTEIN L18A
Chain Cf
60S RIBOSOMAL PROTEIN L35A

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3706 s