IL_4UJE_257

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CCGAAAG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

4UJE|1|A2|A|1629, 4UJE|1|A2|G|1633

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|1499
4UJE|1|A2|C|1500
4UJE|1|A2|G|1501
4UJE|1|A2|A|1502
4UJE|1|A2|A|1503
4UJE|1|A2|A|1504
4UJE|1|A2|G|1505
*
4UJE|1|A2|C|1627
4UJE|1|A2|U|1628
4UJE|1|A2|A|1629
4UJE|1|A2|G|1630
4UJE|1|A2|U|1631
4UJE|1|A2|A|1632
4UJE|1|A2|G|1633
4UJE|1|A2|C|1634
4UJE|1|A2|U|1635
4UJE|1|A2|G|1636

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CC

60S RIBOSOMAL PROTEIN L4

Chain CL

60S RIBOSOMAL PROTEIN L13

Chain CN

60S RIBOSOMAL PROTEIN L15

Chain Ca

60S RIBOSOMAL PROTEIN L27A

Chain Cj

60S RIBOSOMAL PROTEIN L37