IL_4UJE_259

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CCGGUAAA*UUUAAAUGG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|1710
4UJE|1|A2|C|1711
4UJE|1|A2|G|1712
4UJE|1|A2|G|1713
4UJE|1|A2|U|1714
4UJE|1|A2|A|1715
4UJE|1|A2|A|1716
4UJE|1|A2|A|1717
*
4UJE|1|A2|U|1769
4UJE|1|A2|U|1770
4UJE|1|A2|U|1771
4UJE|1|A2|A|1772
4UJE|1|A2|A|1773
4UJE|1|A2|A|1774
4UJE|1|A2|U|1775
4UJE|1|A2|G|1776
4UJE|1|A2|G|1777

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain A4

5S ribosomal RNA; 5S rRNA

Chain CD

60S RIBOSOMAL PROTEIN L5

Chain CF

60S RIBOSOMAL PROTEIN L7

Chain CI

60S RIBOSOMAL PROTEIN L10

Chain CT

60S RIBOSOMAL PROTEIN L21