IL_4UJE_276

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CUCU*AACGUGAG

Length

12 nucleotides

Bulged bases

4UJE|1|A2|A|4478, 4UJE|1|A2|C|4479, 4UJE|1|A2|G|4482, 4UJE|1|A2|A|4483

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|4416
4UJE|1|A2|U|4417
4UJE|1|A2|C|4418
4UJE|1|A2|U|4419
*
4UJE|1|A2|A|4477
4UJE|1|A2|A|4478
4UJE|1|A2|C|4479
4UJE|1|A2|G|4480
4UJE|1|A2|U|4481
4UJE|1|A2|G|4482
4UJE|1|A2|A|4483
4UJE|1|A2|G|4484

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CB

60S RIBOSOMAL PROTEIN L3

Chain CV

60S RIBOSOMAL PROTEIN L23