IL_4UJE_278

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UUGCCAU*AGGCGAA

Length

14 nucleotides

Bulged bases

4UJE|1|A2|G|4679, 4UJE|1|A2|C|4680, 4UJE|1|A2|G|4681

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|U|4539
4UJE|1|A2|U|4540
4UJE|1|A2|G|4541
4UJE|1|A2|C|4542
4UJE|1|A2|C|4543
4UJE|1|A2|A|4544
4UJE|1|A2|U|4545
*
4UJE|1|A2|A|4677
4UJE|1|A2|G|4678
4UJE|1|A2|G|4679
4UJE|1|A2|C|4680
4UJE|1|A2|G|4681
4UJE|1|A2|A|4682
4UJE|1|A2|A|4683

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CB

60S RIBOSOMAL PROTEIN L3

Chain CO

60S RIBOSOMAL PROTEIN L13A