IL_4UJE_280

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UGCUU*AAUGGGG

Length

12 nucleotides

Bulged bases

4UJE|1|A2|A|4616, 4UJE|1|A2|U|4617

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|U|4598
4UJE|1|A2|G|4599
4UJE|1|A2|C|4600
4UJE|1|A2|U|4601
4UJE|1|A2|U|4602
*
4UJE|1|A2|A|4615
4UJE|1|A2|A|4616
4UJE|1|A2|U|4617
4UJE|1|A2|G|4618
4UJE|1|A2|G|4619
4UJE|1|A2|G|4620
4UJE|1|A2|G|4621

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CR

60S RIBOSOMAL PROTEIN L19

Chain CW

60S RIBOSOMAL PROTEIN L24

Chain Cd

60S RIBOSOMAL PROTEIN L31