IL_4UJE_283
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CCUCGGAUAGC*GUGCGGAGUG
- Length
- 21 nucleotides
- Bulged bases
- 4UJE|1|A2|U|4717, 4UJE|1|A2|C|4718, 4UJE|1|A2|G|4719, 4UJE|1|A2|G|4724, 4UJE|1|A2|G|4825, 4UJE|1|A2|C|4826, 4UJE|1|A2|A|4829, 4UJE|1|A2|U|4831
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|A2|C|4715
4UJE|1|A2|C|4716
4UJE|1|A2|U|4717
4UJE|1|A2|C|4718
4UJE|1|A2|G|4719
4UJE|1|A2|G|4720
4UJE|1|A2|A|4721
4UJE|1|A2|U|4722
4UJE|1|A2|A|4723
4UJE|1|A2|G|4724
4UJE|1|A2|C|4725
*
4UJE|1|A2|G|4823
4UJE|1|A2|U|4824
4UJE|1|A2|G|4825
4UJE|1|A2|C|4826
4UJE|1|A2|G|4827
4UJE|1|A2|G|4828
4UJE|1|A2|A|4829
4UJE|1|A2|G|4830
4UJE|1|A2|U|4831
4UJE|1|A2|G|4832
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CE
- 60S RIBOSOMAL PROTEIN L6
- Chain CH
- 60S RIBOSOMAL PROTEIN L9
- Chain CM
- 60S RIBOSOMAL PROTEIN L14
- Chain CO
- 60S RIBOSOMAL PROTEIN L13A
- Chain CS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Cf
- 60S RIBOSOMAL PROTEIN L35A
Coloring options: