3D structure

PDB id
4UJE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
UCUCAAA*UGACGAAA
Length
15 nucleotides
Bulged bases
4UJE|1|B1|A|516
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UJE|1|B1|U|34
4UJE|1|B1|C|35
4UJE|1|B1|U|36
4UJE|1|B1|C|37
4UJE|1|B1|A|38
4UJE|1|B1|A|39
4UJE|1|B1|A|40
*
4UJE|1|B1|U|514
4UJE|1|B1|G|515
4UJE|1|B1|A|516
4UJE|1|B1|C|517
4UJE|1|B1|G|518
4UJE|1|B1|A|519
4UJE|1|B1|A|520
4UJE|1|B1|A|521

Current chains

Chain B1
18S Ribosomal RNA

Nearby chains

Chain BE
40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1
Chain BJ
40S RIBOSOMAL PROTEIN S9
Chain BY
40S RIBOSOMAL PROTEIN S24

Coloring options:

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