3D structure

PDB id
4UJE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
GGAAGGGC*GCCCUUU
Length
15 nucleotides
Bulged bases
4UJE|1|B1|G|1207
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UJE|1|B1|G|1206
4UJE|1|B1|G|1207
4UJE|1|B1|A|1208
4UJE|1|B1|A|1209
4UJE|1|B1|G|1210
4UJE|1|B1|G|1211
4UJE|1|B1|G|1212
4UJE|1|B1|C|1213
*
4UJE|1|B1|G|1686
4UJE|1|B1|C|1687
4UJE|1|B1|C|1688
4UJE|1|B1|C|1689
4UJE|1|B1|U|1690
4UJE|1|B1|U|1691
4UJE|1|B1|U|1692

Current chains

Chain B1
18S Ribosomal RNA

Nearby chains

Chain AV
Transfer RNA; tRNA
Chain AW
Transfer RNA; tRNA
Chain AX
Messenger RNA
Chain BC
40S RIBOSOMAL PROTEIN S2
Chain BQ
40S RIBOSOMAL PROTEIN S16
Chain Ba
40S RIBOSOMAL PROTEIN S26
Chain Bc
40S RIBOSOMAL PROTEIN S28

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0687 s