IL_4UJE_308
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGCCC*GAGCGCU
- Length
- 12 nucleotides
- Bulged bases
- 4UJE|1|B1|C|1783
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_308 not in the Motif Atlas
- Geometric match to IL_6CZR_167
- Geometric discrepancy: 0.3163
- The information below is about IL_6CZR_167
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4UJE|1|B1|G|1748
4UJE|1|B1|G|1749
4UJE|1|B1|C|1750
4UJE|1|B1|C|1751
4UJE|1|B1|C|1752
*
4UJE|1|B1|G|1780
4UJE|1|B1|A|1781
4UJE|1|B1|G|1782
4UJE|1|B1|C|1783
4UJE|1|B1|G|1784
4UJE|1|B1|C|1785
4UJE|1|B1|U|1786
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BG
- 40S RIBOSOMAL PROTEIN S6
Coloring options: