3D structure

PDB id
4UJE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
UGGAAUG*CGAGAGA
Length
14 nucleotides
Bulged bases
4UJE|1|A2|A|2637, 4UJE|1|A2|U|2638, 4UJE|1|A2|A|2651
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UJE|1|A2|U|2633
4UJE|1|A2|G|2634
4UJE|1|A2|G|2635
4UJE|1|A2|A|2636
4UJE|1|A2|A|2637
4UJE|1|A2|U|2638
4UJE|1|A2|G|2639
*
4UJE|1|A2|C|2649
4UJE|1|A2|G|2650
4UJE|1|A2|A|2651
4UJE|1|A2|G|2652
4UJE|1|A2|A|2653
4UJE|1|A2|G|2654
4UJE|1|A2|A|2655

Current chains

Chain A2
28S Ribosomal RNA

Nearby chains

Chain BN
40S RIBOSOMAL PROTEIN S13
Chain CR
60S RIBOSOMAL PROTEIN L19
Chain CZ
60S RIBOSOMAL PROTEIN L27
Chain Cc
60S RIBOSOMAL PROTEIN L30
Chain Cg
60S RIBOSOMAL PROTEIN L34
Chain Cp
60S RIBOSOMAL PROTEIN L37A

Coloring options:

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