IL_4UY8_004
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 4UY8|1|A|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UY8_004 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.1188
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4UY8|1|A|G|81
4UY8|1|A|U|82
4UY8|1|A|A|83
4UY8|1|A|A|84
4UY8|1|A|G|85
*
4UY8|1|A|C|97
4UY8|1|A|G|98
4UY8|1|A|U|99
4UY8|1|A|U|100
4UY8|1|A|A|101
4UY8|1|A|U|102
4UY8|1|A|A|103
4UY8|1|A|A|104
4UY8|1|A|C|105
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain U
- 50S RIBOSOMAL PROTEIN L24
- Chain Y
- 50S RIBOSOMAL PROTEIN L29
Coloring options: