IL_4UY8_011

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_011 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2355

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4UY8|1|A|C|274
4UY8|1|A|C|275
4UY8|1|A|U|276
4UY8|1|A|G|277
4UY8|1|A|A|278
4UY8|1|A|A|279
4UY8|1|A|U|280
4UY8|1|A|C|281
*
4UY8|1|A|G|359
4UY8|1|A|U|360
4UY8|1|A|G|361
4UY8|1|A|A|362
4UY8|1|A|G|363

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains