IL_4UY8_033

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGG*UACC

Length

7 nucleotides

Bulged bases

4UY8|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_033 not in the Motif Atlas

Geometric match to IL_5B2P_002

Geometric discrepancy: 0.333

The information below is about IL_5B2P_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

4UY8|1|A|G|879
4UY8|1|A|G|880
4UY8|1|A|G|881
*
4UY8|1|A|U|895
4UY8|1|A|A|896
4UY8|1|A|C|897
4UY8|1|A|C|898

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains