IL_4UY8_035
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4UY8|1|A|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UY8_035 not in the Motif Atlas
- Homologous match to IL_5J7L_277
- Geometric discrepancy: 0.0589
- The information below is about IL_5J7L_277
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
4UY8|1|A|C|998
4UY8|1|A|U|999
4UY8|1|A|A|1000
4UY8|1|A|A|1001
4UY8|1|A|G|1002
*
4UY8|1|A|C|1153
4UY8|1|A|G|1154
4UY8|1|A|A|1155
4UY8|1|A|A|1156
4UY8|1|A|G|1157
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
- Chain R
- 50S RIBOSOMAL PROTEIN L21
- Chain Z
- 50S RIBOSOMAL PROTEIN L30
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