IL_4UY8_039
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 4UY8|1|A|A|1127, 4UY8|1|A|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UY8_039 not in the Motif Atlas
- Geometric match to IL_5J7L_281
- Geometric discrepancy: 0.0641
- The information below is about IL_5J7L_281
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
4UY8|1|A|G|1024
4UY8|1|A|G|1025
4UY8|1|A|G|1026
4UY8|1|A|A|1027
4UY8|1|A|A|1028
4UY8|1|A|A|1029
4UY8|1|A|C|1030
*
4UY8|1|A|G|1124
4UY8|1|A|G|1125
4UY8|1|A|A|1126
4UY8|1|A|A|1127
4UY8|1|A|G|1128
4UY8|1|A|A|1129
4UY8|1|A|U|1130
4UY8|1|A|G|1131
4UY8|1|A|U|1132
4UY8|1|A|A|1133
4UY8|1|A|A|1134
4UY8|1|A|C|1135
4UY8|1|A|G|1136
4UY8|1|A|G|1137
4UY8|1|A|G|1138
4UY8|1|A|G|1139
4UY8|1|A|C|1140
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain 4
- 50S RIBOSOMAL PROTEIN L36
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain J
- 50S RIBOSOMAL PROTEIN L13
- Chain M
- 50S RIBOSOMAL PROTEIN L16
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