IL_4UY8_045

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_045 not in the Motif Atlas

Homologous match to IL_4WF9_043

Geometric discrepancy: 0.2292

The information below is about IL_4WF9_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UY8|1|A|G|1168
4UY8|1|A|A|1169
4UY8|1|A|C|1170
*
4UY8|1|A|G|1179
4UY8|1|A|U|1180
4UY8|1|A|U|1181

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain R

50S RIBOSOMAL PROTEIN L21