IL_4UY8_049
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AUAAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UY8_049 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.0672
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4UY8|1|A|A|1262
4UY8|1|A|U|1263
4UY8|1|A|A|1264
4UY8|1|A|A|1265
4UY8|1|A|G|1266
4UY8|1|A|U|1267
4UY8|1|A|A|1268
4UY8|1|A|A|1269
*
4UY8|1|A|U|2011
4UY8|1|A|G|2012
4UY8|1|A|A|2013
4UY8|1|A|A|2014
4UY8|1|A|A|2015
4UY8|1|A|U|2016
4UY8|1|A|U|2017
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain 7
- TRYPTOPHANASE
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: