IL_4UY8_060

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_060 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3395

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.1

Basepair signature

cWW-L-R-L-R-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

4UY8|1|A|U|1474
4UY8|1|A|G|1475
4UY8|1|A|U|1476
4UY8|1|A|A|1477
4UY8|1|A|G|1478
4UY8|1|A|G|1479
*
4UY8|1|A|C|1512
4UY8|1|A|U|1513
4UY8|1|A|G|1514
4UY8|1|A|A|1515
4UY8|1|A|G|1516
4UY8|1|A|G|1517

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains