IL_4UY8_061

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_061 not in the Motif Atlas

Homologous match to IL_5J7L_301

Geometric discrepancy: 0.2547

The information below is about IL_5J7L_301

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4UY8|1|A|U|1481
4UY8|1|A|G|1482
*
4UY8|1|A|C|1507
4UY8|1|A|A|1508
4UY8|1|A|A|1509
4UY8|1|A|G|1510

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains