IL_4UY8_086
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 4UY8|1|A|G|2238
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UY8_086 not in the Motif Atlas
- Homologous match to IL_5J7L_325
- Geometric discrepancy: 0.1121
- The information below is about IL_5J7L_325
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_85599.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
4UY8|1|A|U|2081
4UY8|1|A|A|2082
4UY8|1|A|G|2083
*
4UY8|1|A|U|2236
4UY8|1|A|G|2237
4UY8|1|A|G|2238
4UY8|1|A|G|2239
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain X
- 50S RIBOSOMAL PROTEIN L28
Coloring options: