IL_4V19_002

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAAGC*GAUGAAAGAAU

Length

16 nucleotides

Bulged bases

4V19|1|A|G|138

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41876.1

Basepair signature

cWW-L-R-tSH-R-R-R-R-R-L-L-cWW

Number of instances in this motif group

1

Unit IDs

4V19|1|A|A|4
4V19|1|A|A|5
4V19|1|A|A|6
4V19|1|A|G|7
4V19|1|A|C|8
*
4V19|1|A|G|131
4V19|1|A|A|132
4V19|1|A|U|133
4V19|1|A|G|134
4V19|1|A|A|135
4V19|1|A|A|136
4V19|1|A|A|137
4V19|1|A|G|138
4V19|1|A|A|139
4V19|1|A|A|140
4V19|1|A|U|146

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 2

MITORIBOSOMAL PROTEIN UL29M, MRPL47

Chain U

MITORIBOSOMAL PROTEIN BL20M, MRPL20

Chain W

MITORIBOSOMAL PROTEIN UL22M, MRPL22

Chain Y

MITORIBOSOMAL PROTEIN UL24M, MRPL24