3D structure

PDB id
4V19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CCU*AUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_62295.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
400

Unit IDs

4V19|1|A|C|180
4V19|1|A|C|181
4V19|1|A|U|182
*
4V19|1|A|A|191
4V19|1|A|U|192
4V19|1|A|G|193

Current chains

Chain A
MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 5
MITORIBOSOMAL PROTEIN BL32M, MRPL32
Chain F
MITORIBOSOMAL PROTEIN UL4M, MRPL4
Chain P
MITORIBOSOMAL PROTEIN UL15M, MRPL15
Chain U
MITORIBOSOMAL PROTEIN BL20M, MRPL20
Chain V
MITORIBOSOMAL PROTEIN BL21M, MRPL21

Coloring options:

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