IL_4V19_008

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAA*UUUAG

Length

9 nucleotides

Bulged bases

4V19|1|A|U|227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30634.1

Basepair signature

cWW-L-R-tSS-cWW

Number of instances in this motif group

2

Unit IDs

4V19|1|A|C|215
4V19|1|A|A|216
4V19|1|A|A|217
4V19|1|A|A|218
*
4V19|1|A|U|225
4V19|1|A|U|226
4V19|1|A|U|227
4V19|1|A|A|228
4V19|1|A|G|229

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 8

MITORIBOSOMAL PROTEIN BL35M, MRPL35

Chain F

MITORIBOSOMAL PROTEIN UL4M, MRPL4

Chain P

MITORIBOSOMAL PROTEIN UL15M, MRPL15