IL_4V19_010

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAAC*GUGAUAGC

Length

13 nucleotides

Bulged bases

4V19|1|A|G|347, 4V19|1|A|G|351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28684.1

Basepair signature

cWW-R-tHW-tHW-tWW-cWW

Number of instances in this motif group

12

Unit IDs

4V19|1|A|G|241
4V19|1|A|A|242
4V19|1|A|A|243
4V19|1|A|A|244
4V19|1|A|C|245
*
4V19|1|A|G|345
4V19|1|A|U|346
4V19|1|A|G|347
4V19|1|A|A|348
4V19|1|A|U|349
4V19|1|A|A|350
4V19|1|A|G|351
4V19|1|A|C|352

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain F

MITORIBOSOMAL PROTEIN UL4M, MRPL4

Chain P

MITORIBOSOMAL PROTEIN UL15M, MRPL15