IL_4V19_042

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAA*UAACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_17752.1

Basepair signature

cWW-L-R-R-R-R-cWW

Number of instances in this motif group

2

Unit IDs

4V19|1|A|A|1083
4V19|1|A|A|1084
4V19|1|A|A|1085
*
4V19|1|A|U|1124
4V19|1|A|A|1125
4V19|1|A|A|1126
4V19|1|A|C|1127
4V19|1|A|A|1128
4V19|1|A|U|1129

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 1

MITORIBOSOMAL PROTEIN BL28M, MRPL28

Chain D

MITORIBOSOMAL PROTEIN UL2M, MRPL2

Chain I

MITORIBOSOMAL PROTEIN BL9M, MRPL9