3D structure

PDB id
4V19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UCUAG*CGACA
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_35765.1
Basepair signature
cWW-tSH-tHS-tHS-cWW
Number of instances in this motif group
58

Unit IDs

4V19|1|A|U|1287
4V19|1|A|C|1288
4V19|1|A|U|1289
4V19|1|A|A|1290
4V19|1|A|G|1291
*
4V19|1|A|C|1301
4V19|1|A|G|1302
4V19|1|A|A|1303
4V19|1|A|C|1304
4V19|1|A|A|1305

Current chains

Chain A
MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 9
MITORIBOSOMAL PROTEIN BL36M, MRPL36
Chain Q
MITORIBOSOMAL PROTEIN UL16M, MRPL16

Coloring options:

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