IL_4V49_077

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UUGAAAC*GCGGAGGA

Length

15 nucleotides

Bulged bases

4V49|1|B0|G|742

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_077 not in the Motif Atlas

Geometric match to IL_7RQB_001

Geometric discrepancy: 0.2321

The information below is about IL_7RQB_001

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_66414.6

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

4V49|1|B0|U|715
4V49|1|B0|U|716
4V49|1|B0|G|717
4V49|1|B0|A|718
4V49|1|B0|A|719
4V49|1|B0|A|720
4V49|1|B0|C|721
*
4V49|1|B0|G|736
4V49|1|B0|C|737
4V49|1|B0|G|738
4V49|1|B0|G|739
4V49|1|B0|A|740
4V49|1|B0|G|741
4V49|1|B0|G|742
4V49|1|B0|A|743

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2