IL_4V49_081
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- AUGUU*AGU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V49_081 not in the Motif Atlas
- Geometric match to IL_4V9F_097
- Geometric discrepancy: 0.2628
- The information below is about IL_4V9F_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
4V49|1|B0|A|856
4V49|1|B0|U|857
4V49|1|B0|G|858
4V49|1|B0|U|859
4V49|1|B0|U|860
*
4V49|1|B0|A|944
4V49|1|B0|G|945
4V49|1|B0|U|946
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: