IL_4V49_101

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

4V49|1|B0|G|1261

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_101 not in the Motif Atlas

Homologous match to IL_4WF9_044

Geometric discrepancy: 0.5249

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

4V49|1|B0|C|1210
4V49|1|B0|G|1211
4V49|1|B0|U|1212
*
4V49|1|B0|A|1260
4V49|1|B0|G|1261
4V49|1|B0|U|1262
4V49|1|B0|G|1263

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BC

50S ribosomal protein L4

Chain BJ

50S ribosomal protein L15

Chain BO

50S ribosomal protein L20