IL_4V49_105
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V49_105 not in the Motif Atlas
- Homologous match to IL_7RQB_049
- Geometric discrepancy: 0.2129
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4V49|1|B0|A|1275
4V49|1|B0|U|1276
4V49|1|B0|G|1277
4V49|1|B0|A|1278
4V49|1|B0|G|1279
4V49|1|B0|U|1280
4V49|1|B0|A|1281
4V49|1|B0|A|1282
*
4V49|1|B0|U|1994
4V49|1|B0|G|1995
4V49|1|B0|A|1996
4V49|1|B0|A|1997
4V49|1|B0|A|1998
4V49|1|B0|U|1999
4V49|1|B0|U|2000
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L4
- Chain BQ
- 50S ribosomal protein L22
- Chain BZ
- 50S ribosomal protein L32
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