IL_4V49_116

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

AAGG*CCU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_116 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.325

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4V49|1|B0|A|1492
4V49|1|B0|A|1493
4V49|1|B0|G|1494
4V49|1|B0|G|1495
*
4V49|1|B0|C|1528
4V49|1|B0|C|1529
4V49|1|B0|U|1530

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains