IL_4V49_137

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CUG*UUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_137 not in the Motif Atlas

Homologous match to IL_5J7L_326

Geometric discrepancy: 0.2197

The information below is about IL_5J7L_326

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

4V49|1|B0|C|2068
4V49|1|B0|U|2069
4V49|1|B0|G|2070
*
4V49|1|B0|U|2211
4V49|1|B0|U|2212
4V49|1|B0|G|2213

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2

Chain BY

50S ribosomal protein L31