IL_4V49_177

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GGUG*CUC

Length

7 nucleotides

Bulged bases

4V49|1|B0|G|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_177 not in the Motif Atlas

Homologous match to IL_9DFE_020

Geometric discrepancy: 0.4725

The information below is about IL_9DFE_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.1

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

23

Unit IDs

4V49|1|B0|G|751
4V49|1|B0|G|752
4V49|1|B0|U|753
4V49|1|B0|G|754
*
4V49|1|B0|C|769
4V49|1|B0|U|770
4V49|1|B0|C|771

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34