IL_4V49_188

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UAAG*CAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_188 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.3423

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

4V49|1|B0|U|1856
4V49|1|B0|A|3865
4V49|1|B0|A|3866
4V49|1|B0|G|3867
*
4V49|1|B0|C|3874
4V49|1|B0|A|3875
4V49|1|B0|A|3876
4V49|1|B0|A|3877
4V49|1|B0|G|1861

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B5

50S ribosomal protein L1P