IL_4V4A_064

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

4V4A|1|B0|A|455

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_064 not in the Motif Atlas

Homologous match to IL_7RQB_002

Geometric discrepancy: 0.2746

The information below is about IL_7RQB_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

4V4A|1|B0|G|36
4V4A|1|B0|C|37
*
4V4A|1|B0|G|454
4V4A|1|B0|A|455
4V4A|1|B0|C|456

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BC

50S ribosomal protein L4

Chain BO

50S ribosomal protein L20