IL_4V4A_077

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

UUGAAAC*GCGGAGGA

Length

15 nucleotides

Bulged bases

4V4A|1|B0|G|742

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_077 not in the Motif Atlas

Geometric match to IL_7RQB_001

Geometric discrepancy: 0.2321

The information below is about IL_7RQB_001

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_66414.6

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

4V4A|1|B0|U|715
4V4A|1|B0|U|716
4V4A|1|B0|G|717
4V4A|1|B0|A|718
4V4A|1|B0|A|719
4V4A|1|B0|A|720
4V4A|1|B0|C|721
*
4V4A|1|B0|G|736
4V4A|1|B0|C|737
4V4A|1|B0|G|738
4V4A|1|B0|G|739
4V4A|1|B0|A|740
4V4A|1|B0|G|741
4V4A|1|B0|G|742
4V4A|1|B0|A|743

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2