IL_4V4A_085
3D structure
- PDB id
- 4V4A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 9.5 Å
Loop
- Sequence
- CUGUAG*CGAAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4A_085 not in the Motif Atlas
- Homologous match to IL_7A0S_027
- Geometric discrepancy: 0.4892
- The information below is about IL_7A0S_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_81631.1
- Basepair signature
- cWW-L-R-cSH-R-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V4A|1|B0|C|870
4V4A|1|B0|U|871
4V4A|1|B0|G|872
4V4A|1|B0|U|873
4V4A|1|B0|A|874
4V4A|1|B0|G|875
*
4V4A|1|B0|C|927
4V4A|1|B0|G|928
4V4A|1|B0|A|929
4V4A|1|B0|A|930
4V4A|1|B0|G|931
4V4A|1|B0|G|932
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B9
- 5S ribosomal RNA; 5S rRNA
- Chain BK
- 50S ribosomal protein L16
- Chain BU
- 50S ribosomal protein L27
- Chain BX
- 50S ribosomal protein L30
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