IL_4V4A_096
3D structure
- PDB id
- 4V4A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 9.5 Å
Loop
- Sequence
- GGUUAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 4V4A|1|B0|U|1037, 4V4A|1|B0|A|1138, 4V4A|1|B0|U|1141
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4A_096 not in the Motif Atlas
- Geometric match to IL_7A0S_037
- Geometric discrepancy: 0.2942
- The information below is about IL_7A0S_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.4
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
4V4A|1|B0|G|1035
4V4A|1|B0|G|1036
4V4A|1|B0|U|1037
4V4A|1|B0|U|1038
4V4A|1|B0|A|1039
4V4A|1|B0|A|1040
4V4A|1|B0|G|1041
*
4V4A|1|B0|C|1135
4V4A|1|B0|G|1136
4V4A|1|B0|A|1137
4V4A|1|B0|A|1138
4V4A|1|B0|A|1139
4V4A|1|B0|A|1140
4V4A|1|B0|U|1141
4V4A|1|B0|G|1142
4V4A|1|B0|A|1143
4V4A|1|B0|U|1144
4V4A|1|B0|C|1145
4V4A|1|B0|G|1146
4V4A|1|B0|G|1147
4V4A|1|B0|G|1148
4V4A|1|B0|G|1149
4V4A|1|B0|C|1150
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L36
- Chain B9
- 5S ribosomal RNA; 5S rRNA
- Chain BB
- 50S ribosomal protein L3
- Chain BH
- 50S ribosomal protein L13
- Chain BK
- 50S ribosomal protein L16
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