IL_4V4A_122
3D structure
- PDB id
- 4V4A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 9.5 Å
Loop
- Sequence
- ACUUUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 4V4A|1|B0|G|1975
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4A_122 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.3423
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
4V4A|1|B0|A|1686
4V4A|1|B0|C|1687
4V4A|1|B0|U|1688
4V4A|1|B0|U|1689
4V4A|1|B0|U|1690
4V4A|1|B0|G|1691
*
4V4A|1|B0|C|1973
4V4A|1|B0|U|1974
4V4A|1|B0|G|1975
4V4A|1|B0|U|1976
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BB
- 50S ribosomal protein L3
- Chain BI
- 50S ribosomal protein L14
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