3D structure

PDB id
4V4A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
9.5 Å

Loop

Sequence
GCGAAAUUCCUUGU*ACCUGCAC
Length
22 nucleotides
Bulged bases
4V4A|1|B0|A|1921, 4V4A|1|B0|U|1927, 4V4A|1|B0|U|1946
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4A|1|B0|G|1916
4V4A|1|B0|C|1917
4V4A|1|B0|G|1918
4V4A|1|B0|A|1919
4V4A|1|B0|A|1920
4V4A|1|B0|A|1921
4V4A|1|B0|U|1922
4V4A|1|B0|U|1923
4V4A|1|B0|C|1924
4V4A|1|B0|C|1925
4V4A|1|B0|U|1926
4V4A|1|B0|U|1927
4V4A|1|B0|G|1928
4V4A|1|B0|U|1929
*
4V4A|1|B0|A|1943
4V4A|1|B0|C|1944
4V4A|1|B0|C|1945
4V4A|1|B0|U|1946
4V4A|1|B0|G|1947
4V4A|1|B0|C|1948
4V4A|1|B0|A|1949
4V4A|1|B0|C|1950

Current chains

Chain B0
23S RIBOSOMAL RNA

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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