3D structure

PDB id
4V4A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
9.5 Å

Loop

Sequence
CG*CAG
Length
5 nucleotides
Bulged bases
4V4A|1|B0|A|2581
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V4A_150 not in the Motif Atlas
Homologous match to IL_7RQB_101
Geometric discrepancy: 0.3764
The information below is about IL_7RQB_101
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_37497.6
Basepair signature
cWW-L-cWW
Number of instances in this motif group
118

Unit IDs

4V4A|1|B0|C|2570
4V4A|1|B0|G|2571
*
4V4A|1|B0|C|2580
4V4A|1|B0|A|2581
4V4A|1|B0|G|2582

Current chains

Chain B0
23S RIBOSOMAL RNA

Nearby chains

Chain BA
50S ribosomal protein L2

Coloring options:


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