IL_4V4A_191

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CAA*UGUAG

Length

8 nucleotides

Bulged bases

4V4A|1|B0|U|2298, 4V4A|1|B0|A|2299

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_191 not in the Motif Atlas

Geometric match to IL_8VTW_081

Geometric discrepancy: 0.3

The information below is about IL_8VTW_081

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

4V4A|1|B0|C|2276
4V4A|1|B0|A|2277
4V4A|1|B0|A|2278
*
4V4A|1|B0|U|2296
4V4A|1|B0|G|2297
4V4A|1|B0|U|2298
4V4A|1|B0|A|2299
4V4A|1|B0|G|2300

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B9

5S ribosomal RNA; 5S rRNA

Chain BD

50S ribosomal protein L5

Chain BM

50S ribosomal protein L18